Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4381

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4380: 12748 - K00550 OPI3 methylene-fatty-acyl-phospholipid synthase, at 58451 to 59547 12748 mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59708 to 61504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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58,710 - 12748 mRNA_4380 0.24 -0.0
58,716 + 12748 mRNA_4380 0.24 -0.4
58,985 + 12748 mRNA_4380 0.49 0.3
59,174 + 12748 mRNA_4380 0.66 0.5
59,174 + 12748 mRNA_4380 0.66 0.2
59,177 - 12748 mRNA_4380 0.66 -0.5
59,283 - 12748 mRNA_4380 0.76 0.9
59,431 - 12748 mRNA_4380 0.89 -0.4
59,446 + 1.2
59,723 + -1.1
59,913 + 12749 mRNA_4381 0.11 1.2
60,110 - 12749 mRNA_4381 0.22 2.2
60,328 + 12749 mRNA_4381 0.35 -0.2
60,450 - 12749 mRNA_4381 0.41 0.5
60,731 + 12749 mRNA_4381 0.57 0.7
60,758 - 12749 mRNA_4381 0.58 0.6
60,879 + 12749 mRNA_4381 0.65 1.2
61,044 + 12749 mRNA_4381 0.74 1.4
61,057 - 12749 mRNA_4381 0.75 0.3
61,173 + 12749 mRNA_4381 0.82 0.7
61,200 - 12749 mRNA_4381 0.83 -1.6
61,299 - 12749 mRNA_4381 0.89 1.4
61,304 - 12749 mRNA_4381 0.89 2.0
61,603 + 1.0
61,629 - -1.0
61,633 - -0.4
62,159 - 12750 mRNA_4382 0.22 -0.9