Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4376

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46350 to 49394 12743 mRNA_4376: 12744 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 49826 to 51100 12744

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
48,905 + 12743 mRNA_4375 0.84 0.3
49,014 + 12743 mRNA_4375 0.87 0.1
49,028 - 12743 mRNA_4375 0.88 0.6
49,176 + -2.1
49,334 - 0.9
49,348 + -0.4
49,351 - 2.4
49,397 - 1.2
49,415 - 0.9
49,433 - 0.4
49,446 - -0.4
49,628 - 0.8
49,747 - 0.3
49,901 + 0.8
50,136 + 12744 mRNA_4376 0.24 2.4
50,139 - 12744 mRNA_4376 0.25 1.2
50,466 - 12744 mRNA_4376 0.50 -1.6
50,476 + 12744 mRNA_4376 0.51 0.9
50,476 + 12744 mRNA_4376 0.51 0.2
50,589 + 12744 mRNA_4376 0.60 1.3
50,625 - 12744 mRNA_4376 0.63 0.2
50,785 + 12744 mRNA_4376 0.75 1.2
50,788 + 12744 mRNA_4376 0.75 0.5
50,794 + 12744 mRNA_4376 0.76 -2.1
50,908 + 12744 mRNA_4376 0.85 -0.0
50,908 + 12744 mRNA_4376 0.85 -2.0
50,908 + 12744 mRNA_4376 0.85 -1.0
51,105 - 1.4
51,157 + 0.5
51,246 + 1.3
51,347 - 0.5
51,378 + 3.5
51,412 + 0.6
51,564 + 0.4
51,568 - 0.8
51,580 + 0.2
51,702 + -0.4
51,713 - 0.3
51,718 + 1.0
52,007 + 1.8