Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4360

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3087 12728

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1 + -0.9
34 + -1.1
36 + -1.9
40 + 1.4
106 - -0.8
115 + 1.3
156 - 0.3
162 + 1.8
170 + -0.3
318 + 12727 mRNA_4359 0.23 -0.1
397 + 12727 mRNA_4359 0.37 1.8
440 + 12727 mRNA_4359 0.45 1.5
450 + 12727 mRNA_4359 0.47 -0.5
491 + 12727 mRNA_4359 0.55 -0.4
494 - 12727 mRNA_4359 0.55 0.7
500 - 12727 mRNA_4359 0.56 0.4
513 + 12727 mRNA_4359 0.59 1.5
527 - 12727 mRNA_4359 0.61 1.0
535 + 12727 mRNA_4359 0.63 0.5
537 - 12727 mRNA_4359 0.63 0.1
573 - 12727 mRNA_4359 0.70 -0.1
575 - 12727 mRNA_4359 0.70 1.6
575 - 12727 mRNA_4359 0.70 -0.2
585 + 12727 mRNA_4359 0.72 0.6
627 - 12727 mRNA_4359 0.80 0.0
629 + 12727 mRNA_4359 0.80 0.6
632 + 12727 mRNA_4359 0.81 0.8
655 + 12727 mRNA_4359 0.85 -1.4
657 - 12727 mRNA_4359 0.85 1.2
666 + 12727 mRNA_4359 0.87 -0.6
837 + 1.6
866 + 0.8
966 + -0.2
1,080 + 0.9
1,091 + 0.7
1,091 + 0.1
1,092 + 0.3
1,119 + 1.4
1,180 - 12728 mRNA_4360 0.10 0.6
1,185 - 12728 mRNA_4360 0.10 -0.5
1,186 + 12728 mRNA_4360 0.10 -1.2
1,262 + 12728 mRNA_4360 0.14 -0.5
1,362 + 12728 mRNA_4360 0.19 -0.1
1,365 - 12728 mRNA_4360 0.19 0.4
1,368 - 12728 mRNA_4360 0.19 1.9
1,381 + 12728 mRNA_4360 0.20 0.0
1,539 - 12728 mRNA_4360 0.27 0.4
1,589 + 12728 mRNA_4360 0.29 -0.7
1,630 + 12728 mRNA_4360 0.31 0.4
1,688 + 12728 mRNA_4360 0.34 -0.2
1,692 + 12728 mRNA_4360 0.34 1.6
1,698 - 12728 mRNA_4360 0.35 0.6
1,699 + 12728 mRNA_4360 0.35 -0.9
1,763 + 12728 mRNA_4360 0.38 2.5
1,788 + 12728 mRNA_4360 0.39 -1.1
1,796 + 12728 mRNA_4360 0.39 0.3
1,867 + 12728 mRNA_4360 0.43 0.0
2,010 + 12728 mRNA_4360 0.49 -1.4
2,037 + 12728 mRNA_4360 0.51 1.9
2,077 - 12728 mRNA_4360 0.52 0.4
2,125 + 12728 mRNA_4360 0.55 -0.6
2,128 - 12728 mRNA_4360 0.55 -0.3
2,222 + 12728 mRNA_4360 0.59 -0.8
2,224 - 12728 mRNA_4360 0.59 -1.7
2,280 + 12728 mRNA_4360 0.62 0.8
2,303 + 12728 mRNA_4360 0.63 -0.5
2,354 + 12728 mRNA_4360 0.65 0.1
2,357 - 12728 mRNA_4360 0.66 -1.4
2,378 - 12728 mRNA_4360 0.67 2.2
2,396 + 12728 mRNA_4360 0.67 1.0
2,447 - 12728 mRNA_4360 0.70 1.8
2,549 + 12728 mRNA_4360 0.75 1.0
2,681 + 12728 mRNA_4360 0.81 1.7
2,991 + 0.2
3,097 - 1.4
3,106 + -0.0
3,107 + 3.4
3,152 + 0.4
3,276 + 0.1
3,398 + -0.1
3,399 + 0.3
3,417 + -0.4
3,516 + -0.4
3,568 - -0.9
3,574 - 1.6
3,578 + 0.3
3,632 + 0.3
3,691 + 1.5
3,692 - -0.5
3,695 - -0.6
3,719 - 0.3
3,759 + 0.5
3,775 + -1.5
3,843 - 0.2
3,845 - 1.0
3,845 - 0.8
3,850 + 1.9
3,852 + -2.0
3,859 + -1.4