Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4238

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4237: 12605 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 1687514 to 1688995 12605 mRNA_4238: 12606 - KOG1105 Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1, at 1689549 to 1691062 12606 mRNA_4239: 12607 - Hypothetical Protein, at 1691409 to 1692539 12607

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,688,721 + 12605 mRNA_4237 0.81 -0.9
1,689,026 + -1.7
1,689,349 + -0.7
1,689,761 + 12606 mRNA_4238 0.14 0.5
1,690,030 + 12606 mRNA_4238 0.32 -0.5
1,690,030 + 12606 mRNA_4238 0.32 0.2
1,690,068 - 12606 mRNA_4238 0.34 0.3
1,690,084 - 12606 mRNA_4238 0.35 -1.0
1,690,531 - 12606 mRNA_4238 0.65 -0.2
1,691,154 + -0.2
1,691,556 - 12607 mRNA_4239 0.13 -1.9
1,691,721 + 12607 mRNA_4239 0.28 -0.6
1,691,795 - 12607 mRNA_4239 0.34 0.3
1,691,895 + 12607 mRNA_4239 0.43 1.9
1,692,026 - 12607 mRNA_4239 0.55 1.7
1,692,027 + 12607 mRNA_4239 0.55 -0.0
1,692,031 - 12607 mRNA_4239 0.55 -0.4