Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4203

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4203: 12571 - K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2, at 1601510 to 1605241 12571 mRNA_4204: 12572 - K15292 STXBP1, MUNC18-1 syntaxin-binding protein 1, at 1605498 to 1608617 12572

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,600,915 + -3.6
1,601,122 - -2.7
1,603,480 + 12571 mRNA_4203 0.53 -2.1
1,603,986 + 12571 mRNA_4203 0.66 -2.3
1,604,018 + 12571 mRNA_4203 0.67 -3.3
1,604,078 - 12571 mRNA_4203 0.69 -2.1
1,604,456 + 12571 mRNA_4203 0.79 -3.4
1,604,562 + 12571 mRNA_4203 0.82 -3.0
1,605,281 - 1.2
1,605,284 + 0.2
1,605,298 - 0.2
1,605,302 + -0.0
1,605,314 + -1.2
1,605,410 - 0.2
1,605,416 + 0.4
1,605,434 - -0.2
1,605,445 + -0.2
1,605,456 + 0.7
1,605,458 + 1.6