Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4188

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1566413 to 1568898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1569066 to 1571020 12556 mRNA_4189: 12557 - Hypothetical Protein, at 1571432 to 1574972 12557

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
1,568,190 - 12555 mRNA_4187 0.71 -0.1
1,568,342 - 12555 mRNA_4187 0.78 -2.2
1,568,631 - 12555 mRNA_4187 0.89 -0.9
1,568,645 - 12555 mRNA_4187 0.90 -1.3
1,568,660 + -0.3
1,568,748 - 1.1
1,568,763 - -0.6
1,568,795 - 0.0
1,568,797 + -0.5
1,568,816 + -0.9
1,568,910 - -2.8
1,568,924 - 0.2
1,568,927 + -0.6
1,568,934 - -0.1
1,568,935 + 0.2
1,568,937 - -0.7
1,568,940 + -0.6
1,568,940 + -0.1
1,568,943 - 0.7
1,568,944 - -0.2
1,568,945 - 0.6
1,568,946 + -3.9
1,568,946 - -0.2
1,568,947 - -1.3
1,568,951 - 0.5
1,568,953 - -0.9
1,568,954 - 0.8
1,568,958 + 0.2
1,568,958 - -0.8
1,568,958 + -0.9
1,568,971 - 0.2
1,568,974 - 1.6
1,568,975 + -0.4
1,568,976 - -1.1
1,568,978 + 0.7
1,568,981 + -0.9
1,569,017 - -0.3
1,569,035 + 1.6
1,569,126 + 0.6
1,569,243 - 1.5
1,569,590 + 12556 mRNA_4188 0.27 -1.6
1,569,729 + 12556 mRNA_4188 0.34 0.8
1,569,848 - 12556 mRNA_4188 0.40 0.5
1,569,848 - 12556 mRNA_4188 0.40 1.4
1,570,879 - 0.6
1,570,883 + 1.2
1,571,010 - 0.9
1,571,019 + -0.8
1,571,145 - -0.9
1,571,156 + -0.6
1,571,166 + 1.3
1,571,172 - 1.1
1,571,182 + 0.8
1,571,182 + -1.4
1,571,182 + -0.0
1,571,183 + 0.2
1,571,184 - -0.7
1,571,191 + 0.2
1,571,197 - 0.1
1,571,202 - -1.1
1,571,202 - -1.2
1,571,207 + -0.1
1,571,222 + 0.4