Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3942

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3941: 12309 - Hypothetical Protein, at 953111 to 953710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954085 to 956912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957047 to 960564 12311

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
953,117 - -2.9
953,718 + -1.0
953,722 + 0.8
953,835 - 0.3
953,838 + -1.3
953,850 - -0.5
953,850 + 0.1
953,851 - -0.1
953,853 + -0.1
953,963 - 0.5
953,966 - -1.6
953,978 - 0.1
953,987 + -1.1
953,989 + -0.7
953,990 + -1.3
953,990 + 2.4
953,991 - -0.1
953,992 + -0.4
953,992 - 0.0
953,994 - -1.6
953,999 + 0.3
953,999 + 0.2
954,003 + 0.3
954,166 + 0.2
954,570 + 12310 mRNA_3942 0.17 0.8
955,491 + 12310 mRNA_3942 0.50 -0.0
956,209 - 12310 mRNA_3942 0.75 -0.2
956,652 - 2.3
956,657 + -2.1
956,950 - 0.7
956,952 + -2.5
956,958 + -0.0
956,968 - -0.9