Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3906

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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864,761 - 1.4
864,870 - 2.3
864,921 - 0.6
865,062 - 0.7
865,069 + 1.2
865,221 - 0.8
865,230 + -0.9
865,362 + -0.1
865,363 - -0.9
865,382 - 0.9
865,392 + -1.5
865,503 - -0.0
865,505 + 0.4
865,517 + -0.5
865,525 + -0.2
865,526 - -0.0
865,695 - -1.3
866,320 - 12274 mRNA_3906 0.19 -0.5
866,400 - 12274 mRNA_3906 0.21 -0.6
866,668 + 12274 mRNA_3906 0.30 0.6
867,124 + 12274 mRNA_3906 0.45 -0.6
867,664 + 12274 mRNA_3906 0.62 -0.3
867,832 + 12274 mRNA_3906 0.68 -3.5
868,276 + 12274 mRNA_3906 0.82 0.0
868,299 - 12274 mRNA_3906 0.83 -0.2
868,418 - 12274 mRNA_3906 0.87 -0.2
868,555 + -0.2
868,690 - -0.8
868,702 + -0.6
868,878 + 0.2
869,005 - 0.6
869,017 + -0.5
869,164 - 12275 mRNA_3907 0.13 1.1
869,182 + 12275 mRNA_3907 0.16 0.2
869,184 - 12275 mRNA_3907 0.16 0.1
869,782 + 0.6