Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3893

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3892: 12260 - Hypothetical Protein, at 837987 to 839368 12260 mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839639 to 842065 12261 mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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838,801 - 12260 mRNA_3892 0.59 -1.5
838,911 - 12260 mRNA_3892 0.67 -0.1
838,921 + 12260 mRNA_3892 0.68 1.4
839,189 + 12260 mRNA_3892 0.87 0.2
839,215 - 12260 mRNA_3892 0.89 -0.7
839,218 + 12260 mRNA_3892 0.89 0.7
839,255 + -1.3
839,642 - 1.4
839,682 + 0.3
839,911 + 12261 mRNA_3893 0.11 0.6
840,039 + 12261 mRNA_3893 0.16 0.7
840,957 + 12261 mRNA_3893 0.54 1.4
840,970 - 12261 mRNA_3893 0.55 0.5
841,210 + 12261 mRNA_3893 0.65 -1.0
841,210 + 12261 mRNA_3893 0.65 1.2
841,268 + 12261 mRNA_3893 0.67 -0.1
841,690 + 12261 mRNA_3893 0.85 -0.3
841,839 - 0.9
841,853 + -0.1
842,129 - -0.4
842,143 + 3.7
842,151 + 1.9
842,165 + -2.3
842,169 + 1.4
842,172 + 2.0
842,750 + 12262 mRNA_3894 0.27 -0.6
842,769 + 12262 mRNA_3894 0.28 0.8
842,850 + 12262 mRNA_3894 0.35 -0.1
842,899 + 12262 mRNA_3894 0.40 -0.1