Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3867

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3867: 12235 - KOG1812 Predicted E3 ubiquitin ligase, at 782825 to 783717 12235 mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783972 to 787068 12236

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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781,879 + 0.7
781,929 + -0.2
782,028 - -2.8
782,580 + 0.3
782,581 + 1.1
783,011 - 12235 mRNA_3867 0.21 0.5
783,491 + 12235 mRNA_3867 0.75 0.4
783,625 - 12235 mRNA_3867 0.90 -1.6
783,695 - -0.8
783,702 + -1.0
783,709 - 0.2
783,736 + -0.3
783,742 + -0.3
783,751 + 1.1
783,770 + -0.9
783,777 + 1.1
783,781 - -0.4
783,933 - 0.3
783,934 - -0.8
783,938 - 0.7
783,952 + -0.8
783,966 + 0.2
784,120 + 0.5
784,251 + 0.2
784,414 + 12236 mRNA_3868 0.14 -2.1
784,586 + 12236 mRNA_3868 0.20 1.4