Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3829

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3828: 12196 - Hypothetical Protein, at 682813 to 683280 12196 mRNA_3829: 12197 - KOG0519 Sensory transduction histidine kinase, at 684010 to 687695 12197 mRNA_3830: 12198 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 688387 to 689344 12198

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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683,108 - 12196 mRNA_3828 0.63 -0.7
683,128 - 12196 mRNA_3828 0.67 -1.5
683,139 - 12196 mRNA_3828 0.70 0.0
683,143 - 12196 mRNA_3828 0.71 -0.3
683,149 + 12196 mRNA_3828 0.72 -0.2
683,152 - 12196 mRNA_3828 0.72 -0.1
683,156 + 12196 mRNA_3828 0.73 -2.4
683,166 - 12196 mRNA_3828 0.75 -0.2
683,166 - 12196 mRNA_3828 0.75 1.3
683,167 - 12196 mRNA_3828 0.76 -0.1
683,168 + 12196 mRNA_3828 0.76 -0.5
683,170 - 12196 mRNA_3828 0.76 -0.5
683,172 + 12196 mRNA_3828 0.77 -0.0
683,173 - 12196 mRNA_3828 0.77 1.1
683,174 + 12196 mRNA_3828 0.77 -1.3
683,179 + 12196 mRNA_3828 0.78 0.1
683,190 + 12196 mRNA_3828 0.81 0.8
683,196 - 12196 mRNA_3828 0.82 1.2
683,201 + 12196 mRNA_3828 0.83 1.4
683,205 + 12196 mRNA_3828 0.84 0.4
683,205 + 12196 mRNA_3828 0.84 -0.3
683,213 + 12196 mRNA_3828 0.85 -2.7
683,217 - 12196 mRNA_3828 0.86 0.6
683,218 + 12196 mRNA_3828 0.87 0.6
683,219 - 12196 mRNA_3828 0.87 1.5
683,226 + 12196 mRNA_3828 0.88 0.4
683,230 - 12196 mRNA_3828 0.89 -0.3
683,233 + 12196 mRNA_3828 0.90 -0.7
683,236 + -0.8
683,264 + -1.7
683,268 + -0.1
683,331 - 0.7
683,366 - -0.2
683,366 + -0.2
683,367 - 0.7
683,376 - -0.0
683,379 - -0.6
683,380 - 1.7
683,383 + -0.2
683,385 - -0.2
683,402 - 2.4
683,409 - -0.3
683,410 + 0.1
683,410 - 0.4
683,410 - -0.4
683,411 - -0.8
683,414 + 1.4
683,417 - 2.4
683,418 + 0.3
683,419 - -0.9
683,421 - -0.5
683,423 + -1.5
683,438 - -0.3
683,444 - -1.9
683,448 - 0.0
683,461 + 2.0
683,463 - 0.4
683,465 + 1.5
683,467 - 0.7
683,469 - -2.9
683,475 - -0.3
683,476 - 1.1
683,478 + 0.7
683,480 - 1.0
683,485 + -2.0
683,504 + -1.1
683,507 - -1.0
683,508 + -0.3
683,510 + 2.2
683,511 - -0.9
683,515 + -0.1
683,525 + 2.3
683,600 - -0.4
683,626 - 0.4
683,638 + 0.1
683,692 + -0.9
683,792 + 1.1
683,792 + -0.8
683,794 + -0.8
683,797 - -0.0
683,802 - 0.8
683,813 + 0.4
683,821 - 0.5
683,824 - -0.7
683,950 + 1.2
684,110 - -1.0
684,557 + 12197 mRNA_3829 0.15 -0.7
684,920 + 12197 mRNA_3829 0.25 -0.5
684,980 + 12197 mRNA_3829 0.26 -1.3
685,012 - 12197 mRNA_3829 0.27 -0.8
685,220 - 12197 mRNA_3829 0.33 -0.0
685,268 - 12197 mRNA_3829 0.34 2.2
685,372 + 12197 mRNA_3829 0.37 0.7
685,658 + 12197 mRNA_3829 0.45 -1.5
686,869 - 12197 mRNA_3829 0.78 -0.2
687,168 + 12197 mRNA_3829 0.86 2.7
687,182 + 12197 mRNA_3829 0.86 0.6
687,200 + 12197 mRNA_3829 0.87 -2.0
687,202 - 12197 mRNA_3829 0.87 -0.0
687,220 + 12197 mRNA_3829 0.87 0.2
687,241 - 12197 mRNA_3829 0.88 -2.0
687,247 - 12197 mRNA_3829 0.88 -1.0
687,950 + -0.0
688,305 + 0.4