Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3789

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3788: 12156 - Hypothetical Protein, at 583211 to 584056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586055 to 588728 12158

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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583,371 - 12156 mRNA_3788 0.19 0.4
583,409 + 12156 mRNA_3788 0.23 -0.4
583,409 - 12156 mRNA_3788 0.23 -1.1
583,415 - 12156 mRNA_3788 0.24 0.6
583,430 + 12156 mRNA_3788 0.26 -1.1
583,713 - 12156 mRNA_3788 0.59 -0.1
584,317 - 0.2
584,921 + 12157 mRNA_3789 0.49 1.2
585,229 + 12157 mRNA_3789 0.75 1.4
585,317 + 12157 mRNA_3789 0.83 2.4
585,484 - 0.4
585,490 + 1.3
585,491 - 0.3
585,493 - 0.2
585,498 - -0.2
585,614 + 1.0
585,617 - 0.1
585,620 - 1.0
585,621 - -0.7
585,644 + 0.8
585,655 + -1.3
585,658 + -0.6
585,777 - -0.1
585,937 + 0.7