Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3780

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560572 to 561347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561594 to 563970 12148

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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561,275 + 0.7
561,419 - 2.3
561,563 + -0.2
561,660 - 0.2
561,672 - 1.4
561,718 + 0.3
561,844 + 12148 mRNA_3780 0.11 0.8
561,846 - 12148 mRNA_3780 0.11 -2.2
561,847 + 12148 mRNA_3780 0.11 0.1
561,848 - 12148 mRNA_3780 0.11 0.8
561,851 - 12148 mRNA_3780 0.11 0.1
561,852 + 12148 mRNA_3780 0.11 2.6
561,870 + 12148 mRNA_3780 0.12 -1.4
561,987 + 12148 mRNA_3780 0.17 1.3
561,992 - 12148 mRNA_3780 0.17 0.4
561,992 - 12148 mRNA_3780 0.17 -1.7
562,005 - 12148 mRNA_3780 0.17 -0.6
562,153 - 12148 mRNA_3780 0.24 0.3
562,891 + 12148 mRNA_3780 0.55 -0.3
563,038 - 12148 mRNA_3780 0.61 0.1
563,168 - 12148 mRNA_3780 0.66 -0.0
563,319 - 12148 mRNA_3780 0.73 0.9
563,960 - 0.1
564,255 + 0.1
564,483 - -0.4
564,492 + -0.6
564,642 - 1.2
564,762 + -0.2