Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3694

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376601 to 378918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379073 to 379916 12063

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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376,431 - 0.6
376,439 - -1.2
376,459 - -0.4
376,523 + -0.1
376,647 + -0.4
376,748 - -0.9
376,935 - 12062 mRNA_3694 0.14 0.9
377,061 - 12062 mRNA_3694 0.20 -0.4
377,079 - 12062 mRNA_3694 0.21 0.0
377,085 + 12062 mRNA_3694 0.21 -0.4
377,583 - 12062 mRNA_3694 0.42 -0.9
377,645 - 12062 mRNA_3694 0.45 0.2
377,662 + 12062 mRNA_3694 0.46 0.7
378,518 + 12062 mRNA_3694 0.83 -1.0
378,660 - 12062 mRNA_3694 0.89 0.3
378,667 + 12062 mRNA_3694 0.89 -0.2
379,516 + 12063 mRNA_3695 0.52 -0.3
379,681 + 12063 mRNA_3695 0.72 -0.2
379,710 + 12063 mRNA_3695 0.75 0.7
379,723 + 12063 mRNA_3695 0.77 0.4
379,823 + 12063 mRNA_3695 0.89 -0.7