Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3683

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3682: 12050 - K07203 MTOR, FRAP, TOR serine/threonine-protein kinase mTOR, at 332807 to 341262 12050 mRNA_3683: 12051 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 341535 to 343207 12051 mRNA_3684: 12052 - K05955 FNTA protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, at 343363 to 344847 12052

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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341,242 - -2.9
341,426 + 0.5
341,537 + -0.0
341,560 + 0.8
341,940 - 12051 mRNA_3683 0.24 -0.7
342,132 + 12051 mRNA_3683 0.36 -0.5
342,437 + 12051 mRNA_3683 0.54 -1.6
342,484 - 12051 mRNA_3683 0.57 1.3
342,548 - 12051 mRNA_3683 0.61 -0.2
342,844 + 12051 mRNA_3683 0.78 0.5
342,957 - 12051 mRNA_3683 0.85 -0.2
342,965 - 12051 mRNA_3683 0.85 0.5
342,976 + 12051 mRNA_3683 0.86 0.5
342,978 + 12051 mRNA_3683 0.86 0.6
343,107 - 0.5
343,107 - -0.6
343,117 + 0.2
343,134 - 0.4
343,273 + -0.4