Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3668

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300155 to 301036 12035 mRNA_3668: 12036 - K08870 TWF twinfilin, at 301158 to 305676 12036 mRNA_3669: 12037 - KOG1756 Histone 2A, at 305841 to 306858 12037

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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300,959 - 0.2
300,961 + -0.0
300,966 - 2.2
301,096 - 1.4
301,258 - -1.2
301,258 - -0.9
301,268 + 0.4
301,281 + 1.2
301,694 - 12036 mRNA_3668 0.12 -0.5
301,733 - 12036 mRNA_3668 0.13 -0.2
302,281 - 12036 mRNA_3668 0.25 -0.4
302,991 + 12036 mRNA_3668 0.41 0.1
303,195 + 12036 mRNA_3668 0.45 -0.6
303,353 + 12036 mRNA_3668 0.49 -1.1
303,476 - 12036 mRNA_3668 0.51 0.4
303,526 - 12036 mRNA_3668 0.52 -0.1
303,630 - 12036 mRNA_3668 0.55 1.0
304,078 + 12036 mRNA_3668 0.65 0.3
304,222 - 12036 mRNA_3668 0.68 0.9
304,366 - 12036 mRNA_3668 0.71 -0.7
304,495 - 12036 mRNA_3668 0.74 -0.7
304,780 - 12036 mRNA_3668 0.80 0.1
304,814 + 12036 mRNA_3668 0.81 1.4
304,949 - 12036 mRNA_3668 0.84 -0.9
305,238 + -1.0
305,496 + -1.9
306,422 - 12037 mRNA_3669 0.57 0.2