Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3666

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297311 to 299921 12034 mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300155 to 301036 12035

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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296,316 + -0.7
296,319 + -1.4
296,431 - 2.0
296,610 - 1.4
296,612 - 0.4
296,626 + 2.9
296,768 - 2.4
296,781 + 2.4
296,781 + 3.2
296,912 + 0.4
296,912 + 1.7
296,941 + 0.8
297,186 - 3.8
297,354 + -0.2
297,917 - 12034 mRNA_3666 0.23 2.0
298,091 - 12034 mRNA_3666 0.30 1.6
298,368 - 12034 mRNA_3666 0.40 3.3
299,114 + 12034 mRNA_3666 0.69 -2.7
299,817 + -1.4
300,079 + -0.1