Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3608

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161019 to 162088 11976 mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162464 to 163802 11977

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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160,202 + 11975 mRNA_3607 0.84 -1.7
160,222 + 11975 mRNA_3607 0.86 -1.4
160,470 - 0.9
160,508 + -0.8
160,515 - -1.1
160,686 + -0.2
160,813 - 0.6
161,184 - 11976 mRNA_3608 0.15 -0.0
161,232 + 11976 mRNA_3608 0.20 -0.3
161,473 + 11976 mRNA_3608 0.42 1.7
161,523 - 11976 mRNA_3608 0.47 -0.2
161,538 - 11976 mRNA_3608 0.49 0.8
161,709 + 11976 mRNA_3608 0.64 0.8
161,826 + 11976 mRNA_3608 0.75 0.4
162,091 - -2.3
162,421 - 2.0