Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
2 + 0.4
2 + 2.2
2 + -0.3
2 + 2.9
2 + 0.9
2 + -0.0
2 + 0.8
14 + 0.7
26 + 0.1
36 + -0.7
39 + 0.8
42 - 1.4
50 + -0.8
50 + 0.5
50 + 0.6
53 - -1.2
57 + 1.1
59 - -0.3
103 + 0.9
104 + 2.1
112 + -1.2
117 - -1.4
120 - 1.4
140 - -0.8
141 + -0.6
146 + 0.3
150 + -1.1
199 - 11905 mRNA_3537 0.12 -1.3
200 + 11905 mRNA_3537 0.12 -0.4
200 - 11905 mRNA_3537 0.12 -1.0
200 - 11905 mRNA_3537 0.12 -0.8
200 - 11905 mRNA_3537 0.12 -0.3
201 - 11905 mRNA_3537 0.12 -1.1
207 + 11905 mRNA_3537 0.13 2.0
207 + 11905 mRNA_3537 0.13 0.4
207 + 11905 mRNA_3537 0.13 0.2
209 + 11905 mRNA_3537 0.13 0.2
210 + 11905 mRNA_3537 0.13 -0.9
213 + 11905 mRNA_3537 0.14 0.5
213 + 11905 mRNA_3537 0.14 -1.3
214 + 11905 mRNA_3537 0.14 0.6
214 + 11905 mRNA_3537 0.14 0.3
218 + 11905 mRNA_3537 0.14 -0.3
221 + 11905 mRNA_3537 0.15 1.1
222 + 11905 mRNA_3537 0.15 0.5
222 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 1.0
223 - 11905 mRNA_3537 0.15 -0.1
225 - 11905 mRNA_3537 0.15 -1.4
227 - 11905 mRNA_3537 0.15 -0.9
227 + 11905 mRNA_3537 0.15 -1.9
230 + 11905 mRNA_3537 0.16 0.9
230 + 11905 mRNA_3537 0.16 0.4
246 - 11905 mRNA_3537 0.18 -0.8
246 - 11905 mRNA_3537 0.18 -0.7
251 + 11905 mRNA_3537 0.18 -2.1
252 + 11905 mRNA_3537 0.18 0.7
260 + 11905 mRNA_3537 0.19 1.0
262 + 11905 mRNA_3537 0.20 -4.7
265 - 11905 mRNA_3537 0.20 -1.0
272 - 11905 mRNA_3537 0.21 0.1
274 + 11905 mRNA_3537 0.21 -1.6
325 - 11905 mRNA_3537 0.27 -1.7
326 - 11905 mRNA_3537 0.27 1.0
341 + 11905 mRNA_3537 0.29 0.2
359 + 11905 mRNA_3537 0.31 1.0
362 + 11905 mRNA_3537 0.32 0.5
367 - 11905 mRNA_3537 0.32 1.5
368 + 11905 mRNA_3537 0.33 2.1
368 + 11905 mRNA_3537 0.33 -0.2
368 + 11905 mRNA_3537 0.33 0.9
373 + 11905 mRNA_3537 0.33 1.2
373 - 11905 mRNA_3537 0.33 0.6
373 - 11905 mRNA_3537 0.33 0.4
379 + 11905 mRNA_3537 0.34 -0.0
380 + 11905 mRNA_3537 0.34 1.6
417 + 11905 mRNA_3537 0.39 -0.7
452 + 11905 mRNA_3537 0.43 0.7
472 + 11905 mRNA_3537 0.45 0.8
484 + 11905 mRNA_3537 0.47 -0.1
489 - 11905 mRNA_3537 0.47 -1.1
503 - 11905 mRNA_3537 0.49 2.1
511 + 11905 mRNA_3537 0.50 0.6
518 + 11905 mRNA_3537 0.51 -0.5
523 + 11905 mRNA_3537 0.52 0.7
533 + 11905 mRNA_3537 0.53 -0.6
539 + 11905 mRNA_3537 0.54 -0.6
550 + 11905 mRNA_3537 0.55 0.7
579 + 11905 mRNA_3537 0.58 0.1
638 - 11905 mRNA_3537 0.66 -0.8
640 - 11905 mRNA_3537 0.66 -0.6
657 + 11905 mRNA_3537 0.68 0.2
762 - 11905 mRNA_3537 0.81 0.4
768 + 11905 mRNA_3537 0.82 -0.2
791 - 11905 mRNA_3537 0.84 -0.9
801 + 11905 mRNA_3537 0.86 -1.3
804 + 11905 mRNA_3537 0.86 0.1
822 + 11905 mRNA_3537 0.88 0.2
827 + 11905 mRNA_3537 0.89 0.5
842 + 0.2
842 + 1.7
845 - -0.9
962 - -0.5
990 + -0.2
1,074 + -2.4
1,080 - 0.2
1,107 + 1.6
1,110 - -0.4
1,123 + -0.7
1,143 + 0.1
1,256 - 0.1
1,278 + -1.7
1,336 + 0.7
1,371 - 1.2
1,404 - 0.8
1,429 + -1.3
1,450 + -0.5
1,528 + 1.4
1,550 + 0.8
1,647 - 0.1
1,653 + 1.9
1,661 - -0.9
1,663 + -1.4
1,719 + 0.6
1,720 + 1.6
1,760 + 0.6
1,814 - 0.7
1,902 - -0.4