Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3528

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3527: 11895 - K08658 RCE1, FACE2 prenyl protein peptidase, at 315026 to 316520 11895 mRNA_3528: 11896 - Hypothetical Protein, at 316787 to 317613 11896 mRNA_3529: 11897 - Hypothetical Protein, at 318059 to 319264 11897

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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315,826 + 11895 mRNA_3527 0.54 0.6
316,395 + 0.9
316,409 - 0.9
316,653 + 1.7
316,683 + 0.7
316,690 + -0.8
316,694 + -1.1
316,706 + 0.0
316,803 + 0.4
316,817 - -0.2
316,841 + 0.3
316,876 + 11896 mRNA_3528 0.11 -0.1
316,896 + 11896 mRNA_3528 0.13 0.4
316,916 - 11896 mRNA_3528 0.16 0.9
316,996 + 11896 mRNA_3528 0.25 0.3
317,420 - 11896 mRNA_3528 0.77 0.2
317,567 + -0.0
317,582 - 0.6
317,705 + 0.2
317,882 + 0.2
317,926 - 0.8
318,042 + 0.5
318,196 + 11897 mRNA_3529 0.11 3.6
318,207 - 11897 mRNA_3529 0.12 0.5
318,312 - 11897 mRNA_3529 0.21 -0.0
318,471 - 11897 mRNA_3529 0.34 1.9
318,514 - 11897 mRNA_3529 0.38 -0.4
318,594 - 11897 mRNA_3529 0.44 0.1