Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3439

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99777 to 103344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104043 to 108423 11807

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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103,102 + -0.6
103,379 + -0.0
103,397 + 0.2
103,670 - -0.6
103,695 + 1.4
103,777 + -0.0
103,806 - 1.2
103,969 - -0.1
104,231 + -0.3
104,408 + -1.7
104,525 - 11807 mRNA_3439 0.11 -1.4
106,338 + 11807 mRNA_3439 0.52 -0.0
107,531 + 11807 mRNA_3439 0.80 -1.2
107,829 - 11807 mRNA_3439 0.86 0.3
107,914 - 11807 mRNA_3439 0.88 0.0
108,115 + 0.1
109,237 - 1.5
109,244 - -2.2
109,394 + 0.5