Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3435

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90402 to 91512 11802 mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91986 to 94017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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91,520 + 0.9
91,524 + 0.1
91,528 - 0.5
91,645 + 2.2
91,769 - 1.0
91,803 + 0.2
91,825 - 0.3
93,718 - 11803 mRNA_3435 0.85 -0.7
93,863 + 0.1
94,022 + -0.4
94,207 - 0.0
94,477 - 1.2
94,553 + 1.3
94,683 + 0.1