Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3424

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791 mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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64,023 - 11791 mRNA_3423 0.47 -2.3
64,032 - 11791 mRNA_3423 0.48 0.3
64,082 + 11791 mRNA_3423 0.54 0.1
64,167 - 11791 mRNA_3423 0.63 -0.2
65,097 - 1.3
65,234 - 0.0
65,361 + 11792 mRNA_3424 0.14 0.2
65,386 - 11792 mRNA_3424 0.15 -1.6
65,577 + 11792 mRNA_3424 0.22 1.9
65,970 - 11792 mRNA_3424 0.36 -0.8
65,976 + 11792 mRNA_3424 0.36 -2.7
66,554 + 11792 mRNA_3424 0.57 0.8
66,612 - 11792 mRNA_3424 0.59 -0.3
66,651 - 11792 mRNA_3424 0.61 1.0
66,727 + 11792 mRNA_3424 0.63 0.3
66,745 - 11792 mRNA_3424 0.64 -1.3
67,038 - 11792 mRNA_3424 0.75 0.2
67,090 - 11792 mRNA_3424 0.77 -0.5
67,372 - 11792 mRNA_3424 0.87 1.1
67,477 - 0.3
67,491 - -1.7
67,504 + 1.3
67,663 + -0.3
67,927 - -0.0
68,074 + 11793 mRNA_3425 0.13 0.3
68,118 + 11793 mRNA_3425 0.16 0.2
68,236 - 11793 mRNA_3425 0.25 -1.2
68,610 + 11793 mRNA_3425 0.54 1.4