Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3423

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3422: 11790 - KOG2882 p-Nitrophenyl phosphatase, at 61810 to 63146 11790 mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791 mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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63,005 - 11790 mRNA_3422 0.89 1.2
63,137 + 1.2
63,138 - 0.6
63,157 + -0.0
63,158 - 0.0
63,168 + 1.0
63,168 + -0.2
63,304 + 0.9
63,306 - 0.3
63,616 - -0.2
63,620 + 0.7
63,760 - 11791 mRNA_3423 0.18 0.2
64,023 - 11791 mRNA_3423 0.47 -2.3
64,032 - 11791 mRNA_3423 0.48 0.3
64,082 + 11791 mRNA_3423 0.54 0.1
64,167 - 11791 mRNA_3423 0.63 -0.2
65,097 - 1.3
65,234 - 0.0
65,361 + 11792 mRNA_3424 0.14 0.2
65,386 - 11792 mRNA_3424 0.15 -1.6