Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3391

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3390: 11758 - K06617 E2.4.1.82 raffinose synthase, at 564328 to 568075 11758 mRNA_3391: 11759 - Hypothetical Protein, at 568755 to 569736 11759 mRNA_3392: 11760 - HMMPfam-Caffeine-induced death protein 2-PF09774, at 570084 to 570935 11760

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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567,992 + 1.2
568,107 + -0.0
568,123 - 0.4
568,129 - -1.3
568,134 - -1.2
568,145 - -0.3
568,150 + -0.1
568,169 + 0.2
568,171 + -1.6
568,185 - 0.7
568,306 + -4.3
568,453 - 0.9
568,903 + 11759 mRNA_3391 0.15 0.9
569,054 - 11759 mRNA_3391 0.30 1.3
569,180 + 11759 mRNA_3391 0.43 -1.5
569,370 + 11759 mRNA_3391 0.63 0.1
569,477 + 11759 mRNA_3391 0.74 -0.4
569,477 - 11759 mRNA_3391 0.74 1.5
569,618 + 11759 mRNA_3391 0.88 0.9
569,639 - 0.6
569,780 - -0.2
569,781 + -0.7
569,791 + 1.5
569,795 - 0.4
569,799 - -1.1
569,803 + 0.2
569,814 - -2.3
569,860 - -0.5
569,864 + -0.1
569,877 + -0.5
569,987 - 1.5
570,007 - 0.2
570,108 - -2.0
570,281 - 11760 mRNA_3392 0.23 -1.2
570,566 - 11760 mRNA_3392 0.57 -1.0