Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3361

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493196 to 494520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494941 to 495602 11729 mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495992 to 499759 11730

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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494,204 - 11728 mRNA_3360 0.76 -0.6
494,214 - 11728 mRNA_3360 0.77 -0.2
494,245 - 11728 mRNA_3360 0.79 -1.8
494,269 - 11728 mRNA_3360 0.81 0.0
494,398 - -0.3
494,407 - -0.0
494,414 - -1.0
494,534 + 0.1
494,547 - 0.2
494,572 + 0.5
494,846 + 0.8
495,112 - 11729 mRNA_3361 0.26 -0.2
495,158 + 11729 mRNA_3361 0.33 -0.3
495,239 - 11729 mRNA_3361 0.45 -0.4
495,284 + 11729 mRNA_3361 0.52 -0.9
495,868 - -0.6
495,894 - 1.9
495,999 + 0.5
496,002 - -0.1
496,156 + -0.2
496,156 - -1.2
496,185 - -0.7
496,295 - 0.5
496,487 - 11730 mRNA_3362 0.13 0.7
496,487 - 11730 mRNA_3362 0.13 0.5