Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3346

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3345: 11713 - Hypothetical Protein, at 436771 to 439819 11713 mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440091 to 443147 11714

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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439,202 + 11713 mRNA_3345 0.80 0.5
439,206 + 11713 mRNA_3345 0.80 -0.7
439,210 - 11713 mRNA_3345 0.80 1.1
439,669 + -0.2
440,206 - 0.8
440,257 - -0.1
440,368 - 0.1
440,395 - 0.8
440,653 - 11714 mRNA_3346 0.18 1.9
440,681 - 11714 mRNA_3346 0.19 1.1
441,217 - 11714 mRNA_3346 0.37 0.3
441,705 + 11714 mRNA_3346 0.53 2.7
441,839 - 11714 mRNA_3346 0.57 -0.6
441,980 - 11714 mRNA_3346 0.62 -0.1
442,443 + 11714 mRNA_3346 0.77 0.0
442,702 - 11714 mRNA_3346 0.85 1.5
442,732 - 11714 mRNA_3346 0.86 1.5
442,771 + 11714 mRNA_3346 0.88 -0.3
442,888 - -1.3
443,054 + 0.5
443,193 - 1.2
443,199 - 1.3
443,205 - -0.4
443,333 - 0.8