Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3345

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3344: 11712 - Hypothetical Protein, at 435281 to 435909 11712 mRNA_3345: 11713 - Hypothetical Protein, at 436771 to 439819 11713 mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440091 to 443147 11714

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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435,942 - 0.3
436,000 + 0.2
436,006 - -2.0
436,024 - 0.1
436,030 + -2.3
436,100 - -1.0
436,112 + 1.4
436,114 - 0.6
436,130 - -0.3
436,132 - -0.3
436,179 + -0.4
436,179 - 0.4
436,180 + -2.3
436,202 - -0.5
436,212 - 0.4
436,229 - 0.2
436,235 + 0.3
436,238 + -0.1
436,240 + 0.1
436,240 + 0.0
436,242 - 0.4
436,242 - -1.7
436,242 - 0.8
436,250 + 0.6
436,250 + -1.9
436,272 + -1.9
436,275 + 0.9
436,278 + 0.3
436,288 + 0.0
436,297 - -1.4
436,303 + 0.2
436,320 + -1.1
436,321 - -0.0
436,325 + -1.2
436,329 + -0.2
436,332 - -0.5
436,332 - 1.5
436,339 - 0.4
436,342 - -0.1
436,356 - -1.2
436,358 + 1.5
436,457 - -1.0
436,458 - 1.3
436,460 + -0.6
436,471 - -0.2
436,476 - 1.2
436,494 + 0.4
436,505 + 1.2
436,508 - -0.5
436,523 + -0.2
436,526 + 0.2
436,530 - 0.9
436,532 + 1.1
436,557 + 2.0
436,674 + 1.3
436,689 - -0.5
436,787 - -2.3
436,816 + -0.3
436,839 + 0.2
436,841 + -0.9
436,875 + -2.0
436,962 + 0.6
436,995 + -0.1
437,119 - 11713 mRNA_3345 0.11 1.4
437,140 - 11713 mRNA_3345 0.12 -0.1
437,260 + 11713 mRNA_3345 0.16 -1.2
437,305 - 11713 mRNA_3345 0.18 0.5
437,319 + 11713 mRNA_3345 0.18 -0.1
437,558 + 11713 mRNA_3345 0.26 -0.5
437,705 + 11713 mRNA_3345 0.31 -0.4
437,705 + 11713 mRNA_3345 0.31 1.0
437,733 + 11713 mRNA_3345 0.32 0.6
437,965 - 11713 mRNA_3345 0.39 -2.1
438,282 + 11713 mRNA_3345 0.50 -1.7
438,285 + 11713 mRNA_3345 0.50 1.0
438,285 + 11713 mRNA_3345 0.50 0.3
438,315 - 11713 mRNA_3345 0.51 -2.1
438,592 + 11713 mRNA_3345 0.60 -0.2
438,891 - 11713 mRNA_3345 0.70 1.4
439,022 + 11713 mRNA_3345 0.74 0.6
439,202 + 11713 mRNA_3345 0.80 0.5
439,206 + 11713 mRNA_3345 0.80 -0.7
439,210 - 11713 mRNA_3345 0.80 1.1
439,669 + -0.2
440,206 - 0.8
440,257 - -0.1
440,368 - 0.1
440,395 - 0.8
440,653 - 11714 mRNA_3346 0.18 1.9
440,681 - 11714 mRNA_3346 0.19 1.1