Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3342

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3341: 11709 - K20724 TMEM33 transmembrane protein 33, at 428327 to 429727 11709 mRNA_3342: 11710 - PRINTS-Proline rich extensin signature-PR01217, at 430306 to 432208 11710

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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429,443 + 11709 mRNA_3341 0.80 1.7
429,595 + 0.2
429,635 - 1.8
429,739 - 0.5
429,746 + 0.2
429,750 + -1.9
429,753 - 0.1
429,838 + 0.2
429,954 - 0.6
430,081 + 0.4
430,093 - -0.4
430,123 + 1.4
430,202 - 0.1
430,243 + -0.0
430,703 - 11710 mRNA_3342 0.21 -1.7
430,704 + 11710 mRNA_3342 0.21 2.1
430,710 - 11710 mRNA_3342 0.21 0.4
431,150 - 11710 mRNA_3342 0.44 0.8
431,745 + 11710 mRNA_3342 0.76 -0.2
431,762 + 11710 mRNA_3342 0.77 0.6
431,882 + 11710 mRNA_3342 0.83 0.9
432,052 + 0.4
432,200 + 0.4
432,209 + 0.8
432,352 + -0.6
432,359 - -0.2
432,367 + -0.3
432,415 - -0.8
432,419 - -0.4
432,420 - 0.4
432,424 - 0.3
432,427 - -0.7
432,434 - 0.0