Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3284

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052 11651 mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291181 to 293324 11652 mRNA_3285: 11653 - KOG2069 Golgi transport complex subunit, at 293945 to 296560 11653

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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291,082 - 0.2
291,168 + -0.3
291,456 + 11652 mRNA_3284 0.13 -2.3
291,504 + 11652 mRNA_3284 0.15 1.2
291,893 + 11652 mRNA_3284 0.33 1.4
292,061 + 11652 mRNA_3284 0.41 -0.3
292,066 + 11652 mRNA_3284 0.41 0.0
292,345 + 11652 mRNA_3284 0.54 0.8
292,477 + 11652 mRNA_3284 0.60 0.6
293,408 + 1.2
293,444 + 0.3
293,557 - -0.7
293,590 - 0.4
293,594 + 0.5
293,706 - -1.0
293,822 - -0.9
293,834 - 1.1
294,135 - -3.2