Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3246

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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204,437 - -0.4
204,443 - -0.6
204,445 + 0.1
204,447 - 1.8
204,448 + 0.2
204,448 - -1.1
204,454 + 1.9
204,454 + -1.4
204,455 - -1.8
204,463 + -0.4
204,468 - -0.4
204,473 + 0.5
204,479 + 0.9
204,484 - 0.4
204,491 - 0.6
204,511 - -0.7
204,528 - -0.6
204,534 - 1.0
204,547 - -1.2
204,557 + -2.2
204,639 + -0.7
204,647 + -0.1
204,652 - 1.0
204,654 + 1.3
204,664 - 0.7
204,665 + -0.2
204,678 + 0.6
204,695 + 0.1
204,699 + -0.1
204,724 - -0.9
204,727 + -0.6
204,801 - 2.7
204,811 + -0.2
204,826 + -2.7
204,957 - -0.7
205,112 + 0.3
205,123 + -2.6
205,258 + -1.9
205,351 + 1.2
205,379 - 0.4
205,534 + -0.1
205,548 - 0.1
205,821 + 11614 mRNA_3246 0.22 -0.3
205,842 - 11614 mRNA_3246 0.23 -2.2
205,853 + 11614 mRNA_3246 0.24 0.2
206,075 + 11614 mRNA_3246 0.37 -1.6
206,250 - 11614 mRNA_3246 0.47 -1.9
206,282 + 11614 mRNA_3246 0.48 0.9
206,716 - 11614 mRNA_3246 0.73 -1.3
206,970 - 11614 mRNA_3246 0.88 0.2
206,989 + 11614 mRNA_3246 0.89 0.3
207,159 - 1.0
207,285 - -0.3
207,317 + -0.5
207,327 - 0.1
207,356 + 0.7
207,427 - 1.1
207,605 - 1.0
207,618 - -0.3
207,634 + 1.4
207,730 + 0.2
207,734 + -1.4
207,865 - 11615 mRNA_3247 0.17 -1.7
207,926 - 11615 mRNA_3247 0.20 -0.7
207,984 + 11615 mRNA_3247 0.24 -0.2
208,012 + 11615 mRNA_3247 0.26 0.5