Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3235

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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169,622 + -1.0
169,635 + -0.7
169,873 - -2.6
170,012 + -0.9
170,072 + -2.2
170,135 - 0.4
170,183 + -3.1
170,187 + -0.1
170,188 - -2.4
170,190 - -1.2
170,193 + -0.2
170,197 + -1.0
170,200 - -1.7
170,216 - -0.7
170,220 + 0.7
170,356 + -2.1
170,476 + 0.3
170,616 + 11603 mRNA_3235 0.11 -0.1
170,744 + 11603 mRNA_3235 0.15 0.6
170,770 - 11603 mRNA_3235 0.15 -0.2
170,800 + 11603 mRNA_3235 0.16 0.5
170,894 + 11603 mRNA_3235 0.19 -1.1
170,954 - 11603 mRNA_3235 0.21 0.5
171,132 + 11603 mRNA_3235 0.27 0.9
171,206 + 11603 mRNA_3235 0.29 -0.0
171,473 - 11603 mRNA_3235 0.38 1.0
171,491 + 11603 mRNA_3235 0.38 -0.5
171,495 - 11603 mRNA_3235 0.38 -0.2
171,538 + 11603 mRNA_3235 0.40 1.7
171,574 - 11603 mRNA_3235 0.41 0.0
171,842 - 11603 mRNA_3235 0.49 -0.0
172,017 + 11603 mRNA_3235 0.55 0.6
172,218 + 11603 mRNA_3235 0.61 -1.8
172,268 - 11603 mRNA_3235 0.63 -1.7
172,556 + 11603 mRNA_3235 0.72 0.9
172,556 + 11603 mRNA_3235 0.72 -0.3
172,724 + 11603 mRNA_3235 0.77 -1.8
172,993 - 11603 mRNA_3235 0.85 -0.6
173,184 + 0.2
173,847 + -2.4
173,892 - -3.0
174,169 - 11604 mRNA_3236 0.22 -4.6