Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3204

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79575 to 81413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81556 to 81888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82145 to 83066 11572 mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83287 to 85713 11573

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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81,318 - 1.0
81,318 + -0.1
81,448 + 1.0
81,499 + -0.8
81,716 - 11571 mRNA_3203 0.48 -1.2
81,818 + 11571 mRNA_3203 0.79 0.8
81,890 - 0.6
81,892 - -0.8
81,917 - -0.2
82,093 + -1.0
82,101 - 1.1
82,182 + -2.0
82,248 - 11572 mRNA_3204 0.11 1.3
82,653 - 11572 mRNA_3204 0.55 0.0
82,940 + 11572 mRNA_3204 0.86 0.5
83,124 + 1.5
83,137 + 0.1
83,172 - -0.7
83,263 - -0.7
83,281 - 0.3
83,432 - 0.5
83,585 + 11573 mRNA_3205 0.12 -1.3
83,611 + 11573 mRNA_3205 0.13 -1.6
83,709 + 11573 mRNA_3205 0.17 -1.3
83,822 - 11573 mRNA_3205 0.22 -0.5
83,827 - 11573 mRNA_3205 0.22 0.8
83,832 + 11573 mRNA_3205 0.22 0.2
83,989 + 11573 mRNA_3205 0.29 -0.5
84,009 - 11573 mRNA_3205 0.30 -0.4
84,016 + 11573 mRNA_3205 0.30 0.6