Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3104

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328830 to 331254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331820 to 333279 11472

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
330,999 + 11471 mRNA_3103 0.89 0.7
331,303 - 0.3
331,419 + -0.2
331,430 + 0.5
331,584 - -3.2
331,593 + -0.9
331,859 + -0.6
331,864 + -0.0
331,875 - -1.4
331,877 + -0.2
332,159 - 11472 mRNA_3104 0.23 -0.7
332,167 + 11472 mRNA_3104 0.24 -0.3
332,298 + 11472 mRNA_3104 0.33 0.1
332,611 + 11472 mRNA_3104 0.54 0.6
332,657 - 11472 mRNA_3104 0.57 -2.5
332,721 - 11472 mRNA_3104 0.62 -1.9
332,721 + 11472 mRNA_3104 0.62 -0.4
332,842 + 11472 mRNA_3104 0.70 0.8
332,857 - 11472 mRNA_3104 0.71 -2.2
332,864 + 11472 mRNA_3104 0.72 -0.3
333,022 + 11472 mRNA_3104 0.82 0.1
333,029 - 11472 mRNA_3104 0.83 -0.1
333,033 - 11472 mRNA_3104 0.83 -0.3
333,035 + 11472 mRNA_3104 0.83 -0.1
333,148 - 0.0
333,182 + 0.4
333,284 - 1.9
333,289 + 0.0
333,315 + -0.5
333,315 - -1.2
333,322 - -1.9
333,324 + -0.2
333,342 - -1.3
333,364 + -0.6
333,366 + 0.9
333,470 + -0.2
333,471 + 1.3
333,472 - 0.1
333,472 + 0.6
333,475 - 1.7
333,480 - -0.7
333,481 + 0.3
333,482 - -0.4
333,484 - -0.7
333,485 - -1.9
333,485 + 0.8
333,486 - 0.2
333,487 - -0.1
333,489 + -0.1
333,489 - 0.2
333,489 + 0.0
333,489 + 0.3
333,493 + 0.2
333,499 - 0.1
333,500 + 1.1
333,501 + 0.2
333,501 + -1.4
333,502 + -1.0
333,514 + 0.3
333,516 - 0.3
333,518 - 2.1
333,519 + 1.4
333,520 + -0.4
333,523 - -0.2
333,523 + 0.6
333,532 - 3.1
333,537 + -0.6
333,554 - -1.3
333,582 + 0.0
333,646 - 0.2
333,648 - -1.2
333,653 + 0.6
333,657 + 1.0
333,657 + -0.0
333,662 + 0.3
333,663 - -0.2
333,663 - -0.2
333,664 - 0.2
333,664 + 0.8
333,665 + 2.5
333,666 - 1.2
333,667 - 1.0
333,674 - 1.1
333,675 - -0.3
333,676 - -0.4
333,676 + -0.6
333,676 + -0.6
333,681 - -0.5
333,705 + 0.1
333,706 - -0.5
333,706 - 0.2
333,706 - 0.8
333,706 - -0.5
333,707 - 0.1
333,708 - 0.4
333,708 - 0.4
333,708 - 0.4
333,718 + -1.9
333,718 - 0.6
333,720 - -0.1
333,729 - 0.1
333,730 - -0.1
333,733 - 0.2
333,735 + -1.4
333,749 + 1.1
333,754 - -0.1
333,767 - 2.1
333,768 + 0.7
333,783 + 1.6
333,788 + 1.3
333,798 + 1.4
333,843 + 0.1
333,889 - 0.2
333,889 - 0.9
333,905 - 0.1
333,905 - 0.3
333,906 + -0.2
333,910 - 0.4
333,914 - -0.1
333,915 + 0.8
333,920 + -0.1
333,923 + -1.8
333,925 - 1.3
333,929 + 0.5
333,968 + -0.2
334,021 + 0.4
334,045 - -0.6
334,073 + -0.5
334,086 - 1.8
334,088 + -0.1
334,089 + -0.8
334,107 + 0.1
334,117 + 0.1
334,195 - 0.8
334,207 - -0.3
334,214 - 0.4
334,214 - 0.6
334,217 - -0.0
334,225 + -0.2
334,227 + 0.5
334,228 + -1.2
334,234 - -1.1
334,246 - -0.9
334,248 - 0.2
334,249 + -0.2
334,253 - 1.0
334,259 + -0.3