Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3099

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312938 to 315396 11466 mRNA_3099: 11467 - Hypothetical Protein, at 315457 to 316238 11467

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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314,496 + 11466 mRNA_3098 0.63 -1.6
314,510 + 11466 mRNA_3098 0.64 0.8
314,655 - 11466 mRNA_3098 0.70 0.9
314,854 + 11466 mRNA_3098 0.78 0.1
314,886 + 11466 mRNA_3098 0.79 0.7
314,952 + 11466 mRNA_3098 0.82 -4.3
315,276 - -0.4
315,441 - 0.3
315,450 + -0.3
315,500 - 2.0
315,704 + 11467 mRNA_3099 0.32 1.0
315,716 - 11467 mRNA_3099 0.33 1.6
315,721 - 11467 mRNA_3099 0.34 0.4
315,728 + 11467 mRNA_3099 0.35 -0.7
316,014 + 11467 mRNA_3099 0.71 -0.3
316,303 - 1.0
316,600 - 0.8
316,615 + -0.7
316,881 + -0.3
317,034 - -0.7
317,195 + -0.2