Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3010

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3009: 11377 - Hypothetical Protein, at 65747 to 66498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66880 to 69062 11378

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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65,912 - 11377 mRNA_3009 0.22 0.1
65,913 + 11377 mRNA_3009 0.22 -1.3
65,914 + 11377 mRNA_3009 0.22 -0.4
65,918 + 11377 mRNA_3009 0.23 1.0
65,939 - 11377 mRNA_3009 0.26 -0.5
65,941 + 11377 mRNA_3009 0.26 0.9
66,007 + 11377 mRNA_3009 0.35 -1.1
66,015 - 11377 mRNA_3009 0.36 1.5
66,018 + 11377 mRNA_3009 0.36 0.1
66,033 + 11377 mRNA_3009 0.38 0.7
66,052 - 11377 mRNA_3009 0.41 0.7
66,073 - 11377 mRNA_3009 0.43 0.1
66,077 - 11377 mRNA_3009 0.44 2.5
66,335 - 11377 mRNA_3009 0.78 0.3
66,651 - 2.4
66,782 - -0.7
66,813 + 0.1
66,820 + -0.1
66,821 - 0.1
66,825 - 2.1
66,829 - -0.3
66,834 + -1.8
66,834 - 1.0
66,834 - -0.1
66,835 + -0.6
66,839 - 0.3
66,840 + 3.1
66,841 + -0.6
66,843 + -0.8
66,851 + 0.6
66,852 - -0.1
66,852 - 0.3
66,977 + -0.8
66,981 + -0.6
66,983 + 1.6
66,992 - 1.4
66,993 + -0.0
67,169 + 11378 mRNA_3010 0.13 0.6
67,171 - 11378 mRNA_3010 0.13 -0.2
67,172 - 11378 mRNA_3010 0.13 1.2
67,427 + 11378 mRNA_3010 0.25 -0.0
67,431 + 11378 mRNA_3010 0.25 -1.5
67,742 + 11378 mRNA_3010 0.39 -0.7
68,012 - 11378 mRNA_3010 0.52 -1.4
68,161 + 11378 mRNA_3010 0.59 -1.0
68,459 - 11378 mRNA_3010 0.72 0.5
68,716 + 11378 mRNA_3010 0.84 -0.9
68,902 - 0.8
69,031 - -0.0
69,394 + 2.3
69,510 + 1.2
69,565 + 0.5
69,639 + -0.3
69,844 - 0.8
70,030 - -0.2