Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2991

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2990: 11358 - SUPERFAMILY--SSF52047, at 21801 to 25370 11358 mRNA_2991: 11359 - SUPERFAMILY--SSF50685, at 25748 to 27268 11359 mRNA_2992: 11360 - Hypothetical Protein, at 27862 to 28502 11360

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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25,089 + 0.5
25,386 - -0.5
25,389 - -0.1
25,415 - 0.8
25,430 + 2.2
25,430 + 2.6
25,547 - -1.1
25,560 - -0.4
25,564 - -0.4
25,565 + 0.3
25,569 - -0.2
25,582 + -0.2
25,587 - 0.7
25,588 + 0.7
25,889 - -1.2
26,023 + 11359 mRNA_2991 0.18 -0.2
26,023 + 11359 mRNA_2991 0.18 0.4
26,148 - 11359 mRNA_2991 0.26 0.4
26,279 - 11359 mRNA_2991 0.35 0.4
26,297 + 11359 mRNA_2991 0.36 1.7
26,415 - 11359 mRNA_2991 0.44 -2.8
26,631 + 11359 mRNA_2991 0.58 -0.6
26,899 + 11359 mRNA_2991 0.76 0.0
26,941 - 11359 mRNA_2991 0.78 1.0
27,032 + 11359 mRNA_2991 0.84 0.3
27,036 + 11359 mRNA_2991 0.85 0.3
27,163 + -1.0
27,297 - 0.7
27,305 - -1.0
27,327 + 1.6
27,453 + -1.4
27,474 + 0.7
27,485 + -2.4
27,500 + 0.5
27,622 - 1.0
27,774 + 2.2
27,796 + -2.4