Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1 + -1.3
1 + -0.5
1 + -1.3
21 + 0.9
21 + 0.3
21 + -0.2
41 + 1.0
42 + -0.1
44 + -0.7
79 - 1.5
79 + 1.6
149 - 1.4
264 + 11348 mRNA_2980 0.17 -0.3
266 - 11348 mRNA_2980 0.17 2.3
338 - 11348 mRNA_2980 0.22 0.1
341 + 11348 mRNA_2980 0.22 0.5
454 - 11348 mRNA_2980 0.30 2.7
484 - 11348 mRNA_2980 0.32 0.2
489 - 11348 mRNA_2980 0.33 -0.1
491 + 11348 mRNA_2980 0.33 -0.5
507 + 11348 mRNA_2980 0.34 0.3
510 + 11348 mRNA_2980 0.34 0.6
516 - 11348 mRNA_2980 0.35 1.1
654 + 11348 mRNA_2980 0.44 -0.1
719 + 11348 mRNA_2980 0.49 -1.5
1,007 + 11348 mRNA_2980 0.69 0.4
1,048 - 11348 mRNA_2980 0.72 -2.5
1,218 - 11348 mRNA_2980 0.84 0.4
1,248 + 11348 mRNA_2980 0.86 0.7
1,364 + 0.0
1,374 - 1.4
1,401 + 1.0
1,452 + 1.8
1,488 - 0.1
1,503 + -0.1
1,513 + 0.2
1,515 - 1.1
1,551 + -2.2
1,634 + -0.3
1,635 + 1.3
1,657 + 3.0
1,668 + -0.2
1,805 - 0.7
1,805 + -0.7
1,818 + -0.1
1,882 + -0.1
1,934 + 1.0
1,948 + 0.6
1,949 - 0.8
1,974 + -0.5
1,992 + 0.6
1,992 + 0.1
1,993 + 0.6
2,011 + 1.2
2,082 + 0.5
2,084 - -1.7
2,086 + 2.1
2,086 + 0.4
2,086 + -1.0
2,095 + -0.4
2,097 - 0.1
2,098 + 1.0
2,115 + -0.1
2,117 + 1.3
2,120 + 1.0
2,121 - 0.1
2,121 - -1.4
2,125 - -0.4
2,126 + 0.3
2,131 + -2.6
2,131 + -0.7
2,131 + 1.2
2,133 + 0.1
2,243 + -2.1
2,265 + 1.7
2,301 + -1.2
2,320 + 0.5
2,324 - -0.7
2,357 + 2.1