Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2970

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2968: 11336 - Hypothetical Protein, at 673383 to 681780 11336 mRNA_2969: 11337 - Hypothetical Protein, at 682054 to 682344 11337 mRNA_2970: 11338 - K00219 fadH 2,4-dienoyl-CoA reductase (NADPH2), at 682650 to 684031 11338 mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684112 to 685866 11339

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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681,662 + 1.9
681,675 + -0.1
681,762 - -1.0
681,762 - 0.1
681,765 + 1.8
681,824 - 1.1
681,951 + 1.0
681,961 - -0.7
681,962 + 0.1
682,008 - 1.3
682,253 - 11337 mRNA_2969 0.68 -0.8
682,265 - 11337 mRNA_2969 0.73 3.2
682,282 + 11337 mRNA_2969 0.78 0.0
682,397 - 1.3
682,527 - -0.7
682,542 - 0.6
682,549 + 1.7
682,585 - -0.1
682,587 - 0.1
682,588 + -0.6
682,779 - 2.0
682,853 + 11338 mRNA_2970 0.15 -0.0
682,891 - 11338 mRNA_2970 0.17 1.6
682,912 + 11338 mRNA_2970 0.19 2.7
683,050 + 11338 mRNA_2970 0.29 0.2
683,199 - 11338 mRNA_2970 0.40 -0.5
683,290 + 11338 mRNA_2970 0.46 -0.8
683,293 - 11338 mRNA_2970 0.47 1.1
683,302 + 11338 mRNA_2970 0.47 0.8
683,322 - 11338 mRNA_2970 0.49 -1.7
683,407 - 11338 mRNA_2970 0.55 -0.6
683,407 - 11338 mRNA_2970 0.55 0.2
683,408 - 11338 mRNA_2970 0.55 1.3
683,421 + 11338 mRNA_2970 0.56 -0.2
683,429 - 11338 mRNA_2970 0.56 2.1
683,595 - 11338 mRNA_2970 0.68 -0.6
683,752 + 11338 mRNA_2970 0.80 0.4
683,787 + 11338 mRNA_2970 0.82 1.0
683,795 - 11338 mRNA_2970 0.83 0.8
683,798 + 11338 mRNA_2970 0.83 -0.1
683,844 - 11338 mRNA_2970 0.86 0.1
683,862 + 11338 mRNA_2970 0.88 0.8
683,865 - 11338 mRNA_2970 0.88 0.7
683,896 - 1.3
684,027 - 0.4
684,083 + -1.6
684,294 - 11339 mRNA_2971 0.10 0.8
684,354 + 11339 mRNA_2971 0.14 2.4
684,498 + 11339 mRNA_2971 0.22 2.4
684,604 + 11339 mRNA_2971 0.28 0.1
684,633 + 11339 mRNA_2971 0.30 0.1
684,642 - 11339 mRNA_2971 0.30 1.3
684,653 - 11339 mRNA_2971 0.31 -0.3
684,673 + 11339 mRNA_2971 0.32 0.3
684,778 + 11339 mRNA_2971 0.38 0.9
684,788 - 11339 mRNA_2971 0.39 -0.7
684,816 - 11339 mRNA_2971 0.40 0.8
684,816 - 11339 mRNA_2971 0.40 0.5
684,819 + 11339 mRNA_2971 0.40 1.4
684,926 + 11339 mRNA_2971 0.46 1.4
684,968 - 11339 mRNA_2971 0.49 1.0
685,026 - 11339 mRNA_2971 0.52 0.6
685,026 - 11339 mRNA_2971 0.52 1.2
685,029 - 11339 mRNA_2971 0.52 3.6