Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2958

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2957: 11325 - Hypothetical Protein, at 645332 to 646636 11325 mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647495 to 650461 11326

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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646,603 + -0.5
646,635 + -2.6
646,744 - 0.3
646,747 + 2.5
646,821 - -0.2
646,894 - 0.4
647,166 + -1.1
647,168 - -1.1
647,213 + -0.2
647,321 - 0.4
647,607 - 0.6
647,612 - -1.4
647,612 - 1.1
647,612 - -0.1
647,612 - -1.6
647,624 - 1.1
647,635 - -0.4
647,763 - 0.1
647,767 + -0.1
648,061 + 11326 mRNA_2958 0.19 -0.2
648,241 + 11326 mRNA_2958 0.25 -0.5
648,369 - 11326 mRNA_2958 0.29 -1.8
648,509 + 11326 mRNA_2958 0.34 0.6
648,754 - 11326 mRNA_2958 0.42 1.5
649,221 + 11326 mRNA_2958 0.58 0.6
649,260 + 11326 mRNA_2958 0.59 2.6
649,369 + 11326 mRNA_2958 0.63 0.7
649,649 - 11326 mRNA_2958 0.73 2.3
649,652 - 11326 mRNA_2958 0.73 -0.9
650,273 + 1.8
650,377 - 0.5
650,566 + -0.2
650,688 - 0.9
651,118 + 0.6
651,134 - -0.3
651,142 + 0.9
651,289 + -0.3
651,299 + 2.2
651,386 + 0.7
651,447 + 1.9
651,450 - 1.5