Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2954

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2954: 11322 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790, at 640815 to 641841 11322

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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639,815 - -0.7
639,855 - -1.1
639,922 - 0.8
640,129 - 0.6
640,412 + -0.2
640,457 + 0.1
640,481 - 3.3
640,512 - -0.1
640,517 - -1.1
640,517 + 0.4
640,521 - -0.6
640,535 - -0.2
640,539 + -0.5
640,539 + -1.1
640,542 - 0.2
640,553 - 1.3
640,554 + 0.4
640,573 - -1.2
640,585 - 0.3
640,592 + 0.4
640,606 - -0.2
640,616 - 0.6
640,616 - 0.1
640,622 - 2.1
640,622 - 1.0
640,623 + -0.7
640,625 + 0.5
640,626 - -1.8
640,627 + 0.1
640,627 + -0.0
640,631 + 0.4
640,631 + -0.1
640,633 - 2.1
640,638 - -0.2
640,640 - -0.2
640,641 + 0.1
640,644 + 0.8
640,665 + 0.7
640,666 - 0.7
640,667 - -1.0
640,669 + -1.0
640,688 + -1.4
640,691 + -0.5
640,691 - 1.3
640,692 - 0.4
640,693 + -0.1
640,693 - 0.5
640,709 + 1.5
640,714 - -1.4
640,717 + -0.0
640,718 + -0.0
640,718 - 1.0
640,721 + -1.9
640,721 + -0.0
640,721 - 0.4
640,725 + 0.9
640,732 - -0.3
640,737 - -1.3
640,763 - 0.6
640,763 + 0.4
640,763 + -0.3
640,763 + -0.1
640,891 + 0.3
640,913 + 1.3
640,917 + -1.4
641,197 + 11322 mRNA_2954 0.37 -0.9
641,203 - 11322 mRNA_2954 0.38 -1.7
641,499 - 11322 mRNA_2954 0.67 -2.2
641,596 + 11322 mRNA_2954 0.76 0.4
641,608 - 11322 mRNA_2954 0.77 1.2
641,952 + -0.7
641,987 + -0.2
642,058 - 2.0
642,066 - 0.7
642,108 + 0.1
642,177 - -0.1
642,603 + -0.2
642,624 + 0.6
642,627 - 1.3