Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2944

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614601 to 617050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617308 to 618975 11313

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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613,708 - -0.8
613,719 - 0.7
613,786 - -0.6
613,787 + 0.4
613,787 + -2.1
613,788 + -0.1
613,805 - 0.0
613,816 - 0.5
613,821 + 0.1
613,822 + 0.6
613,885 - 0.9
613,997 + 0.2
614,029 - 1.6
614,044 + -0.8
614,053 - 0.5
614,054 + 0.5
614,055 + -0.4
614,071 + 0.1
614,072 + -0.6
614,072 + 1.2
614,072 - -0.3
614,073 - 0.6
614,076 - -1.1
614,076 - 0.1
614,078 - -0.4
614,084 - 0.1
614,101 - -2.0
614,101 + -0.2
614,101 + 0.5
614,103 - 0.8
614,104 - 2.7
614,105 - 0.1
614,109 - 1.0
614,408 + 0.9
614,549 + 0.2
614,666 - 1.8
614,816 - -1.1
615,280 + 11312 mRNA_2944 0.28 3.0
615,672 - 11312 mRNA_2944 0.44 1.5
615,834 + 11312 mRNA_2944 0.50 3.3
616,541 - 11312 mRNA_2944 0.79 3.1
616,549 - 11312 mRNA_2944 0.80 1.4
616,565 - 11312 mRNA_2944 0.80 0.9
616,845 + -2.1
616,851 - 0.0
617,103 - 0.6
617,167 - 1.5
617,178 + 1.6
617,181 + -2.1
617,275 - -0.0
617,327 - -2.0