Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2941

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2940: 11308 - SUPERFAMILY--SSF56300, at 604040 to 607064 11308 mRNA_2941: 11309 - BLAST IncA domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 607263 to 608329 11309 mRNA_2942: 11310 - HMMPfam-VanZ like family-PF04892, at 608424 to 609485 11310

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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606,342 - 11308 mRNA_2940 0.76 -0.3
606,590 - 11308 mRNA_2940 0.84 0.2
606,657 + 11308 mRNA_2940 0.87 0.6
606,795 - -0.8
607,037 - -0.0
607,152 + 0.4
607,202 + -0.5
607,498 - 11309 mRNA_2941 0.22 1.1
607,615 - 11309 mRNA_2941 0.33 0.1
607,649 - 11309 mRNA_2941 0.36 -0.9
607,948 + 11309 mRNA_2941 0.64 -0.6
608,075 - 11309 mRNA_2941 0.76 -0.2
608,093 + 11309 mRNA_2941 0.78 -0.8
608,210 - 11309 mRNA_2941 0.89 -2.5
608,371 + -0.4
608,520 - -0.7
608,524 + 0.1
608,666 - 11310 mRNA_2942 0.23 -2.0
608,814 + 11310 mRNA_2942 0.37 -0.1
609,005 - 11310 mRNA_2942 0.55 1.4
609,117 - 11310 mRNA_2942 0.65 0.7
609,216 + 11310 mRNA_2942 0.75 0.0
609,263 - 11310 mRNA_2942 0.79 0.4