Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2921

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2920: 11288 - KOG2234 Predicted UDP-galactose transporter, at 558435 to 560436 11288 mRNA_2921: 11289 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 560845 to 562189 11289

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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559,895 + 11288 mRNA_2920 0.73 0.4
560,191 + 11288 mRNA_2920 0.88 0.2
560,339 - -1.3
560,623 - -0.1
560,628 - -0.9
560,657 - 1.0
560,965 + 0.3
560,990 + 11289 mRNA_2921 0.11 -0.3
561,205 + 11289 mRNA_2921 0.27 2.1
561,241 + 11289 mRNA_2921 0.29 -0.9
561,330 - 11289 mRNA_2921 0.36 0.2
561,395 + 11289 mRNA_2921 0.41 2.2
561,674 - 11289 mRNA_2921 0.62 -1.9
562,398 - -0.6
562,419 - 0.3
562,527 + 1.0
562,530 + -1.3
562,534 - 0.2
562,601 - 0.2
562,603 + -0.2
562,644 - 0.5
562,665 + -0.0
562,705 - -0.5
562,839 + 1.0
562,841 - 0.3
562,852 + -0.0
562,854 + -0.8
562,875 + 0.2
562,882 - 0.4
562,891 + -0.6
562,994 + -0.7
563,000 + -0.3
563,090 - -0.6
563,126 + -0.6
563,150 + 0.8
563,178 + 1.6