Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2912

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279 mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755 11280 mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524044 to 525341 11281

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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521,431 - 11279 mRNA_2911 0.86 0.0
521,670 - -0.4
522,165 - 11280 mRNA_2912 0.12 -0.3
522,647 - 11280 mRNA_2912 0.38 0.1
522,904 - 11280 mRNA_2912 0.53 -0.0
522,933 + 11280 mRNA_2912 0.54 1.3
523,496 - 11280 mRNA_2912 0.86 1.3
523,618 - 1.8
523,779 - -0.3
524,225 - 11281 mRNA_2913 0.14 -0.7
524,231 - 11281 mRNA_2913 0.14 -0.8
524,608 + 11281 mRNA_2913 0.43 -2.2
524,755 - 11281 mRNA_2913 0.55 -0.4