Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2911

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279 mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755 11280

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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519,499 + 11278 mRNA_2910 0.75 -0.1
519,797 - 11278 mRNA_2910 0.84 0.0
519,810 + 11278 mRNA_2910 0.84 0.0
519,974 + 11278 mRNA_2910 0.89 1.0
520,081 + 2.0
520,093 - -0.1
520,093 - -2.1
520,102 + 0.1
521,431 - 11279 mRNA_2911 0.86 0.0
521,670 - -0.4
522,165 - 11280 mRNA_2912 0.12 -0.3