Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2910

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2909: 11277 - Hypothetical Protein, at 515453 to 516872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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516,147 + 11277 mRNA_2909 0.49 -0.4
516,596 - 11277 mRNA_2909 0.80 0.3
516,762 - -0.4
516,767 - -0.8
516,902 - -0.1
516,904 + 1.1
516,930 + -0.1
516,935 - -2.6
516,951 + -0.3
517,238 + 0.1
517,251 + -0.3
517,415 + 0.3
517,636 + 11278 mRNA_2910 0.17 -0.2
517,659 + 11278 mRNA_2910 0.18 0.2
517,667 + 11278 mRNA_2910 0.18 0.1
517,952 + 11278 mRNA_2910 0.27 1.3
517,952 + 11278 mRNA_2910 0.27 1.4
518,267 + 11278 mRNA_2910 0.36 -0.2
518,270 + 11278 mRNA_2910 0.36 2.7
518,510 - 11278 mRNA_2910 0.44 -0.3
518,629 - 11278 mRNA_2910 0.48 0.4
518,659 - 11278 mRNA_2910 0.49 1.0
518,680 + 11278 mRNA_2910 0.49 0.3
518,681 - 11278 mRNA_2910 0.49 0.9
519,237 + 11278 mRNA_2910 0.66 2.1
519,499 + 11278 mRNA_2910 0.75 -0.1
519,797 - 11278 mRNA_2910 0.84 0.0
519,810 + 11278 mRNA_2910 0.84 0.0
519,974 + 11278 mRNA_2910 0.89 1.0
520,081 + 2.0
520,093 - -0.1
520,093 - -2.1
520,102 + 0.1