Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2853

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364901 to 367915 11220 mRNA_2853: 11221 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 368272 to 370458 11221 mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371099 to 373142 11222

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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368,080 - -1.0
368,170 + -0.3
368,204 + 0.8
368,254 - -0.1
368,310 + 0.8
368,324 - -1.2
368,456 - 1.1
368,459 - -0.3
368,622 - 11221 mRNA_2853 0.16 -0.1
368,643 - 11221 mRNA_2853 0.17 0.9
368,659 + 11221 mRNA_2853 0.18 -0.1
368,948 - 11221 mRNA_2853 0.31 1.1
369,093 - 11221 mRNA_2853 0.38 -0.0
369,169 + 11221 mRNA_2853 0.41 -1.7
369,533 + 11221 mRNA_2853 0.58 -2.1
369,684 + 11221 mRNA_2853 0.65 2.1
369,695 - 11221 mRNA_2853 0.65 2.5
370,098 + 11221 mRNA_2853 0.83 -0.0
370,191 + 11221 mRNA_2853 0.88 -0.5
370,236 + 11221 mRNA_2853 0.90 -0.6
370,240 + -0.0
370,241 - -0.9
370,257 - -0.4
370,356 - -0.4
370,356 - 0.0
370,409 + 2.1
370,418 + -1.1
370,533 + 0.7
370,564 + 1.5
370,565 - -0.7
370,655 + 0.0
370,679 + 0.8
370,686 + 0.2
370,737 + -0.4
370,851 + 0.5
370,864 + -0.6
370,971 - 0.3
370,990 + 0.1
370,993 + 0.1
371,009 - -2.5
371,059 - 0.5
371,177 - -0.1
371,184 - -0.9
371,376 + 11222 mRNA_2854 0.14 -1.6