Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2758

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2757: 11125 - Hypothetical Protein, at 149493 to 150603 11125 mRNA_2758: 11126 - Hypothetical Protein, at 150871 to 152585 11126 mRNA_2759: 11127 - K12158 NEDD8 ubiquitin-like protein Nedd8, at 152848 to 153537 11127

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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150,073 - 11125 mRNA_2757 0.52 -0.3
150,389 + 11125 mRNA_2757 0.81 -2.5
150,810 - 0.0
150,823 - 1.2
150,946 + 1.3
150,954 - 0.2
150,960 - -0.3
150,966 + -0.1
150,993 + 0.1
151,254 - 11126 mRNA_2758 0.22 -0.2
151,260 + 11126 mRNA_2758 0.23 0.6
151,278 + 11126 mRNA_2758 0.24 0.6
151,406 + 11126 mRNA_2758 0.31 -0.1
151,407 - 11126 mRNA_2758 0.31 1.1
151,689 - 11126 mRNA_2758 0.48 0.7
151,717 + 11126 mRNA_2758 0.49 -1.1
151,729 - 11126 mRNA_2758 0.50 0.8
151,808 - 11126 mRNA_2758 0.55 0.0
152,412 + 11126 mRNA_2758 0.90 0.9
152,413 - 11126 mRNA_2758 0.90 0.3
152,424 - 0.8
152,601 - -1.4
152,733 + -1.1
152,737 + -0.2
152,738 - -0.1
152,743 - -1.1
152,744 + 1.0
152,772 + 0.6