Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2755

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141143 to 143248 11122 mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143517 to 145999 11123 mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146345 to 148269 11124

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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142,882 - 11122 mRNA_2754 0.83 0.0
142,993 - 11122 mRNA_2754 0.88 -1.3
143,013 - 11122 mRNA_2754 0.89 -1.0
143,024 + 11122 mRNA_2754 0.89 -0.7
143,161 - 1.0
143,170 - -0.6
143,238 + -0.6
143,324 + -0.4
143,340 - -1.2
143,466 - -0.0
143,482 + -0.1
143,809 + 11123 mRNA_2755 0.12 -0.9
143,997 + 11123 mRNA_2755 0.19 -1.2
144,167 + 11123 mRNA_2755 0.26 0.9
144,167 + 11123 mRNA_2755 0.26 -1.2
144,328 - 11123 mRNA_2755 0.33 0.2
144,342 - 11123 mRNA_2755 0.33 1.9
144,351 - 11123 mRNA_2755 0.34 -0.6
144,379 + 11123 mRNA_2755 0.35 0.7
144,518 + 11123 mRNA_2755 0.40 0.4
144,524 - 11123 mRNA_2755 0.41 -0.9
144,601 + 11123 mRNA_2755 0.44 -1.7
144,767 - 11123 mRNA_2755 0.50 -0.7
144,775 - 11123 mRNA_2755 0.51 0.7
144,776 - 11123 mRNA_2755 0.51 -0.7
145,058 - 11123 mRNA_2755 0.62 -0.1
145,059 - 11123 mRNA_2755 0.62 -0.0
145,202 + 11123 mRNA_2755 0.68 0.3
145,206 - 11123 mRNA_2755 0.68 -0.5
145,270 + 11123 mRNA_2755 0.71 0.0
145,499 - 11123 mRNA_2755 0.80 1.3
145,517 + 11123 mRNA_2755 0.81 1.6
145,541 + 11123 mRNA_2755 0.82 3.7
145,552 + 11123 mRNA_2755 0.82 -0.1
145,571 - 11123 mRNA_2755 0.83 0.0
145,598 - 11123 mRNA_2755 0.84 0.8
145,643 + 11123 mRNA_2755 0.86 -0.3
145,929 + -0.6
145,951 + -1.7
146,098 + -0.3
146,100 - 0.8
146,222 - -0.3
146,266 - 0.9
146,266 + -1.1
146,269 + -1.3
146,280 - -0.4
146,284 - 0.4
146,332 + -0.7
146,406 + -1.0
146,421 - -0.7
146,445 - 0.2
146,588 + 11124 mRNA_2756 0.13 2.4
146,830 + 11124 mRNA_2756 0.25 0.3
146,899 + 11124 mRNA_2756 0.29 0.5